PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002702.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 272aa    MW: 30678.5 Da    PI: 6.3682
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002702.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.3e-141461148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g W++ Ed+ l+++vk++G+g W + ar+ g++R++k++++rw++yl
  Rmu_sc0002702.1_g000022.1 14 KGMWSAREDQVLKNYVKKHGPGKWGKTARETGLKRCGKSVRLRWLNYL 61
                               688*******************************************97 PP
2Myb_DNA-binding47.54e-1567111147
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                +g+ T++E++l+++ +k+ G++ W++Ia +++ gRt++++k++w++ 
  Rmu_sc0002702.1_g000022.1  67 KGNITEDEEDLIIRMHKLVGNR-WSLIAGRIP-GRTDNEIKNYWNST 111
                                6899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGRNSGFEKE GLKKGMWSAR EDQVLKNYVK KHGPGKWGKT ARETGLKRCG KSVRLRWLNY  60
LRPGIKKGNI TEDEEDLIIR MHKLVGNRWS LIAGRIPGRT DNEIKNYWNS TLRKKLAEQK  120
EKESEVSRNE MIKENLPCPV EDDGNQHLTK CDVVVGGGGG LMCIACNVNE EEDHQRRCLG  180
CTSTDTTILS PRVGDGTGGG ANNNIEPAGD DLNYNAMTWN DSIMDLNGGQ LYMSEFLQTE  240
FSKFWEETDR FMNFEVGGCS TINHELPNNW DG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.16e-55MYB family protein