PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002520.1_g000011.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 497aa MW: 54658.1 Da PI: 5.182

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002520.1_g000011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.5	1.7e-34	271	325	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ Rmu_sc0002520.1_g000011.1 271 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 325 79****************************************************8 PP
2	Myb_DNA-binding	56.9	4.7e-18	273	324	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ Rmu_sc0002520.1_g000011.1 273 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 324 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MEVRPAIRRS AAKQLSHMGV SGALSSSLPV LQPSSEETYP KLQDTQQVSM ERPVAQAGHL 60 TSNSGVVGHI FSSPSRFSTD LHYSSVSPHE KQSRNNPFIL QSSSSVSMPL PHSSPSGVFQ 120 STASCAYSKE NNGSWGTDSL PGFLDFPVNT PVENSQIESS SCSGILAAED ISKQNDWQEW 180 ANQLITDDDA LTSNWSDLLV DNNVTDLEPK MTYQVPKPSL NFSAQQSQVS QQQPASSREI 240 IPAPSREILP VQSEDIIAVT TPSSANSAAA KPRMRWTPEL HEAFVEAVNQ LGGSERATPK 300 GVLKLMKVEG LTIYHVKSHL QKYRTARYRP ESSEGSLEKK LTPLEEMTSL DLKTGIEITE 360 ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG KYLQMMFEKQ CKSGGDKLNA SSSSLDDPSA 420 QPSEAMQVSP DKSELEPSKV EHGETEVDAV KSKVASVECA EERIGKQKSP ETEAPKDCEP 480 DVCMSSSQPP KRPKIKE

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MEVRPAIRRS AAKQLSHMGV SGALSSSLPV LQPSSEETYP KLQDTQQVSM ERPVAQAGHL  60
TSNSGVVGHI FSSPSRFSTD LHYSSVSPHE KQSRNNPFIL QSSSSVSMPL PHSSPSGVFQ  120
STASCAYSKE NNGSWGTDSL PGFLDFPVNT PVENSQIESS SCSGILAAED ISKQNDWQEW  180
ANQLITDDDA LTSNWSDLLV DNNVTDLEPK MTYQVPKPSL NFSAQQSQVS QQQPASSREI  240
IPAPSREILP VQSEDIIAVT TPSSANSAAA KPRMRWTPEL HEAFVEAVNQ LGGSERATPK  300
GVLKLMKVEG LTIYHVKSHL QKYRTARYRP ESSEGSLEKK LTPLEEMTSL DLKTGIEITE  360
ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG KYLQMMFEKQ CKSGGDKLNA SSSSLDDPSA  420
QPSEAMQVSP DKSELEPSKV EHGETEVDAV KSKVASVECA EERIGKQKSP ETEAPKDCEP  480
DVCMSSSQPP KRPKIKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-113	G2-like family protein