PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002395.1_g000012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 429aa MW: 46041.7 Da PI: 5.1609 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.3 | 2.1e-30 | 234 | 292 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+edp+++++tY g+H+h+ Rmu_sc0002395.1_g000012.1 234 SDLWAWRKYGQKPIKGSPHPRNYYRCSSSkGCSARKQVERSTEDPNMFVVTYCGDHTHP 292 799************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MEDDDWDLYA VVRSCKAVTT ARASLPVVTA PNPVHHDNSS VPSWMWDWVK HEEVETHVPP 60 VRFSNLEFRA GDGLEEFYQP FFPSPTIDNT AAATATTITT GTSSYAPAGT IIPNSSTSFI 120 SDFGGGSTSS GQHQLQQQQN NFMPANTNTS PHFNPGFAPV SGLGRFPEQQ LLKPPKLETP 180 ENPEELIPRL KPVSLVGPAI PPMQIPPNLI RPRKRKSPVK KMVCHLAADN LSSSDLWAWR 240 KYGQKPIKGS PHPRNYYRCS SSKGCSARKQ VERSTEDPNM FVVTYCGDHT HPRPTHRNSL 300 AGSTRNKAAA TTSKAKDPES PSVQLVPAQG GDDDEQAANS NSGDGDKASE EAEDEEMEED 360 EDDEEFVVSS EDIFLGMKQL GRTGSGGSTL GSLAAGTSGD GFSTKQSNLG SSWGASCSSS 420 AGATVSGGC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 3e-51 | WRKY family protein |