PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002395.1_g000012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 429aa    MW: 46041.7 Da    PI: 5.1609
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002395.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30234292259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+edp+++++tY g+H+h+
  Rmu_sc0002395.1_g000012.1 234 SDLWAWRKYGQKPIKGSPHPRNYYRCSSSkGCSARKQVERSTEDPNMFVVTYCGDHTHP 292
                                799************************998****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MEDDDWDLYA VVRSCKAVTT ARASLPVVTA PNPVHHDNSS VPSWMWDWVK HEEVETHVPP  60
VRFSNLEFRA GDGLEEFYQP FFPSPTIDNT AAATATTITT GTSSYAPAGT IIPNSSTSFI  120
SDFGGGSTSS GQHQLQQQQN NFMPANTNTS PHFNPGFAPV SGLGRFPEQQ LLKPPKLETP  180
ENPEELIPRL KPVSLVGPAI PPMQIPPNLI RPRKRKSPVK KMVCHLAADN LSSSDLWAWR  240
KYGQKPIKGS PHPRNYYRCS SSKGCSARKQ VERSTEDPNM FVVTYCGDHT HPRPTHRNSL  300
AGSTRNKAAA TTSKAKDPES PSVQLVPAQG GDDDEQAANS NSGDGDKASE EAEDEEMEED  360
EDDEEFVVSS EDIFLGMKQL GRTGSGGSTL GSLAAGTSGD GFSTKQSNLG SSWGASCSSS  420
AGATVSGGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-51WRKY family protein