PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002381.1_g000011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 359aa    MW: 40745.1 Da    PI: 5.3952
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002381.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.66.2e-29135195259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                +Dg++WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+++eitY+g+H+++
  Rmu_sc0002381.1_g000011.1 135 EDGHSWRKYGQKDILGAKYPRSYYRCTFRntqNCWATKQVQRSDEDPTIFEITYKGKHTCS 195
                                8**************************998889**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MDTASKSWEQ KSLVGEIIQG MELAQQLRLS LSAASTSSET REFLVQRILT SYEKALLLLQ  60
LSGTPQTSHV DAKSIVLQES RMSANTSPCG DDYNHRSFKD HQDLHEISKK RKIMAKWTDH  120
VIRVSSENGI EGPHEDGHSW RKYGQKDILG AKYPRSYYRC TFRNTQNCWA TKQVQRSDED  180
PTIFEITYKG KHTCSHGSTS VPPPPSPEQQ EQKRHKRENI SEPQQSQVNQ MSFPTNLRVD  240
TENLEDREMM ASPFAFTSTS FGCMMNGDDF LSPMFDNENF FSNFSQHLLS PATGESNYHL  300
APPSQMRNIA ANGQLSESDH TEIISATNSS TNSPIPDMDF PLDLVEFDPN FQFDTPELF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-53WRKY family protein