PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002329.1_g000037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 220aa MW: 25343.8 Da PI: 9.4053 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 50.9 | 5e-16 | 56 | 133 | 1 | 76 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkw 76 +fYn+YAk +GF+vr ++++ s + +g++t+ ++vCs +gkr+ee + +++ +++++etr +C + +kv+ kd++ Rmu_sc0002329.1_g000037.1 56 SFYNAYAKAMGFEVRSDYKRLSiRITGRVTSLRLVCSAQGKRREEYMSnKKRVHKPKKETRFNCPCLFKVRSVKDHHL 133 5******************999999*******************9988345556799*************99887665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MDGSYEPSIS DIGLVSQSSI NGSDCNEMKY KGVRYDNLST EDLKGQEFKT VEEAESFYNA 60 YAKAMGFEVR SDYKRLSIRI TGRVTSLRLV CSAQGKRREE YMSNKKRVHK PKKETRFNCP 120 CLFKVRSVKD HHLALAASMQ RVSIKPCHTY EYIVDRSGGF KNVRFIMKDL YNKLDSRRRE 180 ILLEGDAEAA LAYMRGKVAT DSHFYCKFSI DEDNRLANVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-11 | FAR1 family protein |