PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002292.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 26425.4 Da PI: 10.6376 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 24 | 74 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa+a+++a+++++g+ Rmu_sc0002292.1_g000002.1 24 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDKAAREYRGA 74 59*******.**********8...557**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAPKTAAKSG SGTQNPKPNS LEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA 60 ARAYDKAARE YRGAKAKTNF PTPAELHANT INRGNNNSGG RQNHHFPPAA QARSPSQTST 120 VDSSSPPAQA PPALDLTLSA PRFAAAANAG YFTAASAYHA LPLGRPIFFF DAFARADNVV 180 TTTTGLHRPL AAREMGKPDK SVKAAASPSG GSHSGLSDSD SSTVVDFAHS PAKKGPLDLD 240 LNLPPPAEKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 5e-26 | ERF family protein |