PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002246.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 308aa    MW: 33933.3 Da    PI: 9.721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002246.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19110160256
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                 y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Rmu_sc0002246.1_g000002.1 110 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 160
                                59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
METMQQNHLP FEITDLDIRS SLSNLILTGG TNTLDSIFSH FPQTHTTTTP VSEPLGSSVY  60
LRQRDLLQKF SEQTRANGGA VSRLPTNPVR IPSSSSSCST TYLAPTKKKL YRGVRQRHWG  120
KWVAEIRLPQ NRMRVWLGTY DTAEAAAYAY DRAAYKLRGE YARLNFPNLK DPTKLGFADG  180
SRLNAVKASV DAKIQAICQK VKREKAKKNN AKKSSSGSVK TEKVTKVDSP SSSSSHLTFY  240
DGLGQELLSS PTPTGSEGRC ENSSTPSVSN DGPMGVAMAE MEDLEFEGCS LARMPSFDPE  300
LIWKVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-57ERF family protein