PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002226.1_g000025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 243aa MW: 28444.5 Da PI: 8.4735 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 65.7 | 1.2e-20 | 36 | 132 | 2 | 90 |
FAR1 2 fYne.YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwe 77 fYne +Ak vGFsvr+ ++k+sk +geit++ f Cskegk+ e+ ++ ++ e+r+ +r+gCka+l++ +k ++kw+ Rmu_sc0002226.1_g000025.1 36 FYNEiFAKIVGFSVRMGSTKRSKITGEITWKLFLCSKEGKTYETYENsrrqhsSTMEERRCGIKRMGCKARLNIVFNKaSKKWC 119 888669**********************************999988877777666666777899**********99999***** PP FAR1 78 vtkleleHnHela 90 v+++e+ H+Hel+ Rmu_sc0002226.1_g000025.1 120 VSDFEEAHTHELT 132 ***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MMGEPSLQET NENAIVDEPK LQLGQEFESI EEAYYFYNEI FAKIVGFSVR MGSTKRSKIT 60 GEITWKLFLC SKEGKTYETY ENSRRQHSST MEERRCGIKR MGCKARLNIV FNKASKKWCV 120 SDFEEAHTHE LTTPKRVHLL PSHRKLLTKA KKCLMEKLSS VNVRTSQQFK IMETVAGGIQ 180 NVGCIPRDLR NFERDSREEV KGHDATMLLE FLESEKERKP SFYFEVDRDE QNRMNRCFWA 240 DPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-31 | FAR1 family protein |