PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002132.1_g000068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 350aa MW: 38746.9 Da PI: 4.3901 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.4e-18 | 113 | 163 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s ++GVr++k +g+W+AeIrd + + +r++lg++ tae+A ka+++ r+++e+ Rmu_sc0002132.1_g000068.1 113 SPFRGVRQRK-WGKWAAEIRDpF-----SkTRVWLGTYNTAEDASKAYEERRLYFEK 163 679******9.**********66.....34*******************99988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MPEPRNPRLN QRSSFKKSKR EQLFPAAEPK MVRRVRIICS DPDATDDSSS EDEGVDRKLH 60 KRMVKEITLP FNFTRPSKLV VEPEGSSNNG VETPTPKPKL GVLAKTSKKS SNSPFRGVRQ 120 RKWGKWAAEI RDPFSKTRVW LGTYNTAEDA SKAYEERRLY FEKMLSLATA SEVSSEKSST 180 PTTSCSAVVS RSVNNTQQPA VSSEEESDCV YSQRSPASVL DVETCASNNI RSGGDLENGG 240 DMETEDVEDV GTNALGELPI PNDLGFMDEQ PFGPELNFDG IEPVSFQAEI DSLLLDEIGQ 300 FFNDFGSIDD VHIGGFEGNE PSNLPDCDFG DLGKEDFACW MTETSNIQCQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 1e-38 | ERF family protein |