PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002132.1_g000068.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 350aa    MW: 38746.9 Da    PI: 4.3901
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002132.1_g000068.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.4e-18113163155
                        AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                s ++GVr++k +g+W+AeIrd +     + +r++lg++ tae+A ka+++ r+++e+
  Rmu_sc0002132.1_g000068.1 113 SPFRGVRQRK-WGKWAAEIRDpF-----SkTRVWLGTYNTAEDASKAYEERRLYFEK 163
                                679******9.**********66.....34*******************99988875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MPEPRNPRLN QRSSFKKSKR EQLFPAAEPK MVRRVRIICS DPDATDDSSS EDEGVDRKLH  60
KRMVKEITLP FNFTRPSKLV VEPEGSSNNG VETPTPKPKL GVLAKTSKKS SNSPFRGVRQ  120
RKWGKWAAEI RDPFSKTRVW LGTYNTAEDA SKAYEERRLY FEKMLSLATA SEVSSEKSST  180
PTTSCSAVVS RSVNNTQQPA VSSEEESDCV YSQRSPASVL DVETCASNNI RSGGDLENGG  240
DMETEDVEDV GTNALGELPI PNDLGFMDEQ PFGPELNFDG IEPVSFQAEI DSLLLDEIGQ  300
FFNDFGSIDD VHIGGFEGNE PSNLPDCDFG DLGKEDFACW MTETSNIQCQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-38ERF family protein