PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002110.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRF

Protein Properties

Length: 444aa MW: 48882.1 Da PI: 8.0131

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002110.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	64.3	1.8e-20	152	191	1	40
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsr 40 d+ep+rC+RtDGKkWRCsr+ +++k+CErH+h+ rsr+ Rmu_sc0002110.1_g000002.1 152 DPEPWRCKRTDGKKWRCSRDIAPDQKYCERHCHKRRSRKH 191 79*********************************88764 PP
2	QLQ	45.8	1.9e-16	89	124	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT+aQ ++L++Q +yKy++a +PvP++L++ i++ Rmu_sc0002110.1_g000002.1 89 PFTPAQREELETQTVIYKYIMACLPVPQQLILSITN 124 8*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MNQMVTVMPH HEPQFCSGGF DGETASSNST PLFYNTSNNN NPGITDIYNA ASSDFGSVVV 60 PKNLQQPYYS DSLSFSSSGG MVNVNVRIPF TPAQREELET QTVIYKYIMA CLPVPQQLIL 120 SITNNPSPNG ARDSSRTRGV RDMLVGFSRS LDPEPWRCKR TDGKKWRCSR DIAPDQKYCE 180 RHCHKRRSRK HVESIPNLLN NKNANMLNPK PSSFKNNNQT PFSSSMVTPA AASHGQPRAL 240 DWFVNGESAS VAVSNQEWEQ LMPFKLGLNS HTSKRDTDVD FPKQQNESSL NLYGGGSQGL 300 QSQRSHDYLG GALNSNQAQQ TRHFIDAWST ERDGNGIDEL GQRKRGSVAL NQKLPLSSLT 360 LSMSGENSEA NEENGNRQMG VGVFGSERQN VTWMSPLSWM SSTPGGPLAE ALCLGIASST 420 RATTASNGCR SSNADVRQEF DLIN

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MNQMVTVMPH HEPQFCSGGF DGETASSNST PLFYNTSNNN NPGITDIYNA ASSDFGSVVV  60
PKNLQQPYYS DSLSFSSSGG MVNVNVRIPF TPAQREELET QTVIYKYIMA CLPVPQQLIL  120
SITNNPSPNG ARDSSRTRGV RDMLVGFSRS LDPEPWRCKR TDGKKWRCSR DIAPDQKYCE  180
RHCHKRRSRK HVESIPNLLN NKNANMLNPK PSSFKNNNQT PFSSSMVTPA AASHGQPRAL  240
DWFVNGESAS VAVSNQEWEQ LMPFKLGLNS HTSKRDTDVD FPKQQNESSL NLYGGGSQGL  300
QSQRSHDYLG GALNSNQAQQ TRHFIDAWST ERDGNGIDEL GQRKRGSVAL NQKLPLSSLT  360
LSMSGENSEA NEENGNRQMG VGVFGSERQN VTWMSPLSWM SSTPGGPLAE ALCLGIASST  420
RATTASNGCR SSNADVRQEF DLIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	4e-37	GRF family protein