PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002106.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 320aa MW: 36834.9 Da PI: 7.2599

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002106.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.2	1.5e-19	56	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 +fYn+YAk +GF+ r ++++ s + +g++ + ++vCs +gkr+ee + +++ r++++etr +C + +kv+ + + + ++++ Rmu_sc0002106.1_g000008.1 56 SFYNAYAKAMGFDFRSDYKRLSiRITGRVASLRLVCSAQGKRREEYMSnKKRVRKPKKETRFNCPCLFKVRYCSnINAYIIDDF 139 5***************9999999**************9988845667889*************9899*** PP FAR1 82 eleHnHela 90 ++H+H+la Rmu_sc0002106.1_g000008.1 140 ITNHSHQLA 148 *****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MDGSYEPSIS DIDLVSQSSI NGSDCNEMQY KRVRYDKLST EDLKGQEFKV VEEAESFYNA 60 YAKAMGFDFR SDYKRLSIRI TGRVASLRLV CSAQGKRREE YMSNKKRVRK PKKETRFNCP 120 CLFKVRYCSN INAYIIDDFI TNHSHQLAQA HESHLLRSHR SVEDHHLALA TSMQRVSVKP 180 CHTYEYIVDR SGGFKNVGFI MKDLYNKLDS RRREILLEVR RDLCRFLIDK FDTEECLIEL 240 HGKSMKMSSS DFKQIMSVPE GGIDVDFSGS IEDPDMKPLV DYYVRNSGYT EISDIIAKLD 300 GVNVVDDHFG VSFILLALGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-17	FAR1 family protein