PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002091.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 272aa MW: 30701.4 Da PI: 5.4758 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 55.7 | 1.6e-17 | 63 | 152 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +Y+ Y++ +GF vrk++ ++ g++t+r++vC kegkr+ + + +++ r++r+etr +C a + +k +g++ vt++++ Rmu_sc0002091.1_g000004.1 63 WYRMYGTAIGFGVRKQRVTRG-IGGRVTRRRMVCCKEGKRDAKWLEkEDRVRNPRNETRENCLAACCFHYNKdSGTYFVTEFKT 145 79**************99997.9999**************99876635778899**********999999998*********** PP FAR1 84 eHnHela 90 eH+Hela Rmu_sc0002091.1_g000004.1 146 EHSHELA 152 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MEESPVQETM EPDEEVEDSN SNINATTEGV SPSSLPEGEN FKELTADDVV GREFPTVEDA 60 ERWYRMYGTA IGFGVRKQRV TRGIGGRVTR RRMVCCKEGK RDAKWLEKED RVRNPRNETR 120 ENCLAACCFH YNKDSGTYFV TEFKTEHSHE LAKPKETHFI RSNRCVSNAD LAHVNAMRSC 180 SISTSRAYDY IVNTSGGFEF VGYTSKDMFN KMDADRRAKL IDGDAQAAIA YMNAKAIEDP 240 GFMCKFSVDV DGRLCSGETQ LPCMISHVLG IY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-20 | FAR1 family protein |