PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002060.1_g000011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 98aa MW: 10840 Da PI: 8.3772 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 108.1 | 5e-34 | 28 | 84 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +vrY eC+kNhAa++Gg+avDGC+Efm+s g+egta+al+CaACgCHRnFHRreve+e Rmu_sc0002060.1_g000011.1 28 TVRYGECQKNHAANIGGYAVDGCREFMAS-GQEGTAEALTCAACGCHRNFHRREVETE 84 79**************************9.999*********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MKKQQVVVRR DGSSRRSSSS TSSSMVRTVR YGECQKNHAA NIGGYAVDGC REFMASGQEG 60 TAEALTCAAC GCHRNFHRRE VETEVVCEYT PPNNSYQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74660.1 | 1e-38 | ZF-HD family protein |