PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002034.1_g000015.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 262aa    MW: 28292.3 Da    PI: 9.9235
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002034.1_g000015.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-202272256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++ a+++++g+
  Rmu_sc0002034.1_g000015.1 22 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDTAAREFRGA 72
                               69*******.**********8...557*************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAPRTEKTAT TAKPNGNVKE VHFRGVRKRP WGRYAAEIRD PGKKSRVWLG TFDTAEEAAK  60
AYDTAAREFR GAKAKTNFPL PSENVNLSLF KKNVGSNNIN NNNNGGGGNS NSHSPSQSST  120
VESSSREPAM MVESSSPLDL NLAHGVSSGH AGFGAPMRFP FQHHQIPAIG AVIGVPTSAA  180
NHVLYFDSVF RAGMVKNHQQ YQQQLRFDRN LIHRDFLSGG GFTGGSQSDS DSSTVVDLNH  240
HDQPRGGGFD LDLNLPPPAE LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-29ERF family protein