PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002034.1_g000015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 262aa MW: 28292.3 Da PI: 9.9235 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.7 | 3.9e-20 | 22 | 72 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAaka++ a+++++g+ Rmu_sc0002034.1_g000015.1 22 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDTAAREFRGA 72 69*******.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MAPRTEKTAT TAKPNGNVKE VHFRGVRKRP WGRYAAEIRD PGKKSRVWLG TFDTAEEAAK 60 AYDTAAREFR GAKAKTNFPL PSENVNLSLF KKNVGSNNIN NNNNGGGGNS NSHSPSQSST 120 VESSSREPAM MVESSSPLDL NLAHGVSSGH AGFGAPMRFP FQHHQIPAIG AVIGVPTSAA 180 NHVLYFDSVF RAGMVKNHQQ YQQQLRFDRN LIHRDFLSGG GFTGGSQSDS DSSTVVDLNH 240 HDQPRGGGFD LDLNLPPPAE LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 4e-29 | ERF family protein |