PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002021.1_g000011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 332aa    MW: 36438.8 Da    PI: 6.392
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002021.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-1860109255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aaka+++a+  l+g
  Rmu_sc0002021.1_g000011.1  60 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAAKAYDRAAIILYG 109
                                59****999.**********954...5**********************98876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDEDDTSPPH PLQRNNDNET GVETTTAATT TPTTNTTEAK DNSNNRKCKG KGGPDNNKFR  60
YRGVRQRSWG KWVAEIREPR KRTRKWLGTF ATAEDAAKAY DRAAIILYGS RAQLNLQPSG  120
SSSSQSSTRG SSSSSSSSSS SQTLRPLLPR PSGYPGFSCN FAASAHPYGF VAYNSVGVYP  180
NSSAQMSNQL DNLNPQIQQQ VVVQQQQQQQ FHHYPLSSDG CGDVINTTPT SYPNPSVHAH  240
QQYQVHQQQQ DLNQNQSCTS YEDMNSIVGS AGSSLSMSSQ PMVVAPAVSD PMMMAQGGPM  300
SPMWPLTNEE ECAQSLWDYY GDPFFSDFKG FD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.14e-29ERF family protein