PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002021.1_g000011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 332aa MW: 36438.8 Da PI: 6.392 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.8e-18 | 60 | 109 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aaka+++a+ l+g Rmu_sc0002021.1_g000011.1 60 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAAKAYDRAAIILYG 109 59****999.**********954...5**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MDEDDTSPPH PLQRNNDNET GVETTTAATT TPTTNTTEAK DNSNNRKCKG KGGPDNNKFR 60 YRGVRQRSWG KWVAEIREPR KRTRKWLGTF ATAEDAAKAY DRAAIILYGS RAQLNLQPSG 120 SSSSQSSTRG SSSSSSSSSS SQTLRPLLPR PSGYPGFSCN FAASAHPYGF VAYNSVGVYP 180 NSSAQMSNQL DNLNPQIQQQ VVVQQQQQQQ FHHYPLSSDG CGDVINTTPT SYPNPSVHAH 240 QQYQVHQQQQ DLNQNQSCTS YEDMNSIVGS AGSSLSMSSQ PMVVAPAVSD PMMMAQGGPM 300 SPMWPLTNEE ECAQSLWDYY GDPFFSDFKG FD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 4e-29 | ERF family protein |