PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001966.1_g000015.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 263aa MW: 29187.9 Da PI: 6.8776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001966.1_g000015.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	1.9e-13	91	136	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+e+E+rRR+riNs +++Lr llP + K +Ka+ L k+ve +k+L Rmu_sc0001966.1_g000015.1 91 NHKEAEKRRRERINSHLDKLRALLPCN-----SKTDKASLLAKVVERVKEL 136 8***********************8.....7***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MQPENQELYR FLAQNGLING HPYGSFPGGV ANCEFSSSAS AVPMQHSFCS SSSYYSNNYP 60 LNNLEGSGVL STTSTDTTTT PHDRALAALN NHKEAEKRRR ERINSHLDKL RALLPCNSKT 120 DKASLLAKVV ERVKELKQQM SEITELETFP SETDEITVLS SGEDDYSSNG GIIFKASLSC 180 EDRPELLSDL IEILKSLHLK TLKAEMATLG GRIRSVLIVA ADKDHTIESV PFLQNAFKSL 240 LERSNSSERS KRRRRVLDPT LLV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	256	KRRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	1e-67	bHLH family protein