PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001843.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 179aa    MW: 19800.2 Da    PI: 6.2751
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001843.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-182876355
                        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               y+GVr +  +grWv+eIr+p++   + r++lg+f tae+Aa+a++ a++ ++g
  Rmu_sc0001843.1_g000006.1 28 YRGVRMRQ-WGRWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALTIKG 76
                               9****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MESARTQKGE PKRVSNGSEE GSKQKPMYRG VRMRQWGRWV SEIREPRKKS RIWLGTFATA  60
EMAARAHDVA ALTIKGRSAY LNFPELAQEL PCAASSLPKD IQAAAAKAAA LSYPSCSSSS  120
SHESKTEPAQ DSSSSLKNED DPFFDLPDLL LDVGNYRSTH ECFSLVDASL SIEEPFLWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16750.19e-43ERF family protein