PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001814.1_g000033.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 377aa    MW: 42557.9 Da    PI: 6.2765
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001814.1_g000033.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1362.3e-1171138269
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvk 69 
                                +Y+ YA+ +GF +r ++ ++    g+it+r++vC+kegkre +  + +++ r+ ++e+r++C a    +
  Rmu_sc0001814.1_g000033.1  71 WYRIYATALGFMTRLQRVTRG-IGGRITRRRLVCNKEGKREAKWLQkEDRVRNAKQENRCNCLAACFST 138
                                5999************99997.9999***************9976624666778899999998875544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MNFEHPSSSD CRYTEVQSAD QDSAEPQQEE RVSYGDENFT AKSHVGKNFA ELTAEDVEGR  60
EFATLDDAEI WYRIYATALG FMTRLQRVTR GIGGRITRRR LVCNKEGKRE AKWLQKEDRV  120
RNAKQENRCN CLAACFSTSR ADDYTVKSNG GFEFVGDTEK DLFNKIEAEP RAKLFNQGEE  180
TAPIVGVSDI TMPQLVGFGD EYRCDHVDIP WGVTYSYVSL SPHVKAIAGL TSIATEQSLK  240
ARDEILCLKR DSVKVPSQTG DENTSWHSRQ RKLKLRCAEE GISDMNISFV ILINIGTEPS  300
KRLAGILKCR LQRITAIEVN LQRVVLIFNF YAHWVGGKVA LPQTKVWNLI QVSARGDNDL  360
QTDNITDNDE VGFRAKL