PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001791.1_g000011.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB_related

Protein Properties

Length: 503aa MW: 55022.3 Da PI: 6.7658

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001791.1_g000011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.8e-09	15	46	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rgrW +eEd++l v+q+G g+W++ +++ g Rmu_sc0001791.1_g000011.1 15 RGRWVPEEDKKLFAFVQQHGHGSWNSLPQKAG 46 89*************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MGKQSHTVAS PGIRRGRWVP EEDKKLFAFV QQHGHGSWNS LPQKAGDAVE DSILMPDPLP 60 SVTSSNLSLS MAVSSSRNPG RSGLSADTFS VTATGSGLAS TTLNVSTAED TPHRGHLWPG 120 GTLSRLHAPR STFNFKDDME VFSPLVDVHP ITPTLDKLWD DHDRSKKDSV DKKPSSLLFP 180 SSSRRFPLAE DVSSDHPIFD WKPSSASKQD DSKSSFARLE STPAPYSKSE DSSITPPEAW 240 GGERLSDKYT NLLQPNIMPS RFGMSAQTSG SLISGLPDTS LSTSQTSISS TSLNYANMRI 300 KDVSFNHENS LGFPELLNSS AMPMSPGSKG IMGQSSLDSP TSSLTLHRRF STYAERIGTT 360 SSFSDRTSLA VGSPKTKKTG AEMRELLTSL VSKSDTSTAT ESGILPAMNG GTSQLQKVPQ 420 QDAQQGNSFT FQIFQRTLEE TLDSFQKSVH EDMRNLHIEI LRQFHMQETD MSTVMSKILA 480 NQAELMEEVK SLRKENQQLR QLL

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MGKQSHTVAS PGIRRGRWVP EEDKKLFAFV QQHGHGSWNS LPQKAGDAVE DSILMPDPLP  60
SVTSSNLSLS MAVSSSRNPG RSGLSADTFS VTATGSGLAS TTLNVSTAED TPHRGHLWPG  120
GTLSRLHAPR STFNFKDDME VFSPLVDVHP ITPTLDKLWD DHDRSKKDSV DKKPSSLLFP  180
SSSRRFPLAE DVSSDHPIFD WKPSSASKQD DSKSSFARLE STPAPYSKSE DSSITPPEAW  240
GGERLSDKYT NLLQPNIMPS RFGMSAQTSG SLISGLPDTS LSTSQTSISS TSLNYANMRI  300
KDVSFNHENS LGFPELLNSS AMPMSPGSKG IMGQSSLDSP TSSLTLHRRF STYAERIGTT  360
SSFSDRTSLA VGSPKTKKTG AEMRELLTSL VSKSDTSTAT ESGILPAMNG GTSQLQKVPQ  420
QDAQQGNSFT FQIFQRTLEE TLDSFQKSVH EDMRNLHIEI LRQFHMQETD MSTVMSKILA  480
NQAELMEEVK SLRKENQQLR QLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	2e-11	MYB family protein