PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001755.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 382aa MW: 42807.5 Da PI: 7.2329

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001755.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.7	9.7e-28	208	268	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqKe+ g +fpr+YYrCt++ +Cp+kk+v+r ++dp ++e++Y+g+H+++ Rmu_sc0001755.1_g000002.1 208 EDGFTWRKYGQKEIMGCRFPRGYYRCTHQklyNCPAKKQVQRLDNDPLTFEVMYRGDHTCH 268 7**************************999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MEHQHRSLTT AYIRYPFKFH HNIFNNTTSQ TKQTMDNISE TVSLIHRGCN LARDLESNLP 60 NLPSRPETVS KSLDEIIRVF GAARERLQSS SAAQHDPMSS YVHVAQQQQQ IDASLHEWLR 120 CNYTQAMEDL HIQTQRFASE KSIAATQSDM RDSGADVLQG QIHQAIVSHE LNAASSSQSR 180 PRRRRDDGEI RKLTVPAPRI GNTEIPPEDG FTWRKYGQKE IMGCRFPRGY YRCTHQKLYN 240 CPAKKQVQRL DNDPLTFEVM YRGDHTCHMS STAPSSLPPS DQIKQETMTQ THAVTTQPLG 300 TWLSMDFNAR GGGSSSGGRG DGDGDGVGTS ITTTTRYGKD VEFPVVDLAD AMFNSGSSSS 360 NSMDFMFTSS MDSKWESGDK KN

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MEHQHRSLTT AYIRYPFKFH HNIFNNTTSQ TKQTMDNISE TVSLIHRGCN LARDLESNLP  60
NLPSRPETVS KSLDEIIRVF GAARERLQSS SAAQHDPMSS YVHVAQQQQQ IDASLHEWLR  120
CNYTQAMEDL HIQTQRFASE KSIAATQSDM RDSGADVLQG QIHQAIVSHE LNAASSSQSR  180
PRRRRDDGEI RKLTVPAPRI GNTEIPPEDG FTWRKYGQKE IMGCRFPRGY YRCTHQKLYN  240
CPAKKQVQRL DNDPLTFEVM YRGDHTCHMS STAPSSLPPS DQIKQETMTQ THAVTTQPLG  300
TWLSMDFNAR GGGSSSGGRG DGDGDGVGTS ITTTTRYGKD VEFPVVDLAD AMFNSGSSSS  360
NSMDFMFTSS MDSKWESGDK KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	2e-55	WRKY family protein