PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001755.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 185aa MW: 20558.8 Da PI: 5.4862 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31 | 5e-10 | 1 | 40 | 23 | 59 |
EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Y+rCt + gC+++k+v++ ++ pkv ++tY g+H+++ Rmu_sc0001755.1_g000001.1 1 AYFRCTRKydqGCQATKQVQQVQDTPKVYKTTYIGNHTCR 40 6*****998899**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
AYFRCTRKYD QGCQATKQVQ QVQDTPKVYK TTYIGNHTCR NMIRGPQMIM GSTDPPTGDS 60 HAPPRSTVSS ESGSTPICNK KEHHGVHGGH LPSSSSMIPF VPVKKEECKE GTTSSGLTDN 120 LNDTSDVWPE FKDDHHHDFG FPETTVMSNE NAVSNMQFLD MDLVVKSINF ENEFDFDEAA 180 FPLGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-16 | WRKY family protein |