PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001719.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 119aa MW: 13592 Da PI: 4.5959 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.6 | 2e-13 | 50 | 119 | 4 | 78 |
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 neY+k++GF +k + ++sk +e ++ ++ C++ g++++++ r++ + +++Cka+l+vk+++dgkw+v Rmu_sc0001719.1_g000008.1 50 NEYGKMTGFAASKIACRRSKVAQEWVEVKYACTRFGTKRKTDA-----RNPLPGMKIDCKAMLHVKRRQDGKWVV 119 79**********************************9998765.....59***********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MGLEIDLNLA TKEDDNYNED DMDDDNYNED GMNDDNYNED GVGEECGHSN EYGKMTGFAA 60 SKIACRRSKV AQEWVEVKYA CTRFGTKRKT DARNPLPGMK IDCKAMLHVK RRQDGKWVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.2 | 1e-19 | FAR1 family protein |