PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001711.1_g000029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 82aa MW: 9556.69 Da PI: 4.6938 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.7 | 2.4e-12 | 39 | 80 | 8 | 51 |
AP2 8 wdkkrgr.WvAeIrd.psengkr.krfslgkfgtaeeAakaaiaark 51 ++k+rgr W+AeIrd + r r++lg+f t+eeAa a++ + Rmu_sc0001711.1_g000029.1 39 FNKRRGRkWAAEIRDqC-----RvVRVWLGTFQTEEEAAGAYDIEAI 80 89999999*******55.....58******************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence |
MDELSTELDL EREGKLIMWN WGFEGWPDES GSGRTSAKFN KRRGRKWAAE IRDQCRVVRV 60 WLGTFQTEEE AAGAYDIEAI KF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-12 | ERF family protein |