PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001609.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 427aa MW: 45937.3 Da PI: 9.4361

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001609.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.4	2.3e-21	285	347	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae++eL++kv++L a N +Lk+e+++l++++++l+ e+ Rmu_sc0001609.1_g000020.1 285 ERELKRERRKQSNRESARRSRLRKQAETDELARKVEALNADNVSLKSEINRLTENSDRLRVEN 347 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MGNNDEVKSV KTEKSSPPLT ADLKNHTNQT NIHVYPDWAA MQAYYGPRVP MPPYYNPPAP 60 SGHAPHPYMW GPPQTMMSPY GAPYAAIYSH GSVYAHPAVP LSSNGQGVPL SPAAGNPSSM 120 ETPTKSSGNN DRGLVKKPKG FDALEMSIGN GNAENAEGGA DQSLSKSSAT EGSSSDGNTS 180 GANQTRRKRT REGTPTTVAA IAGDQKPEMQ ASLASAKDVN PASYKALGTT IATVGVPGKL 240 VRPAVSPGVT NVLELKNSSN LNLTSATSVQ QPCAVLPPET WLQNERELKR ERRKQSNRES 300 ARRSRLRKQA ETDELARKVE ALNADNVSLK SEINRLTENS DRLRVENASL MEKLKKARVG 360 RMEEIIMKID DNRVEAISTE NLLSRVNNSG ALARDVEEEG SMYEKNAGAK LHQLLDASPR 420 TDAIVAS

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MGNNDEVKSV KTEKSSPPLT ADLKNHTNQT NIHVYPDWAA MQAYYGPRVP MPPYYNPPAP  60
SGHAPHPYMW GPPQTMMSPY GAPYAAIYSH GSVYAHPAVP LSSNGQGVPL SPAAGNPSSM  120
ETPTKSSGNN DRGLVKKPKG FDALEMSIGN GNAENAEGGA DQSLSKSSAT EGSSSDGNTS  180
GANQTRRKRT REGTPTTVAA IAGDQKPEMQ ASLASAKDVN PASYKALGTT IATVGVPGKL  240
VRPAVSPGVT NVLELKNSSN LNLTSATSVQ QPCAVLPPET WLQNERELKR ERRKQSNRES  300
ARRSRLRKQA ETDELARKVE ALNADNVSLK SEINRLTENS DRLRVENASL MEKLKKARVG  360
RMEEIIMKID DNRVEAISTE NLLSRVNNSG ALARDVEEEG SMYEKNAGAK LHQLLDASPR  420
TDAIVAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	308	RRSRLRK
2	302	309	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-101	bZIP family protein