PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001436.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 29329.2 Da PI: 8.3124 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.9 | 2.9e-22 | 2 | 86 | 6 | 90 |
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y+++v Fs+r+++++k+k++g+ + r fvCskeg r+ +k++ + ++++raetrt+C+a++ +k++k +g+++v ++e+ H+H+l+ Rmu_sc0001436.1_g000002.1 2 YGRRVEFSIRRHTHYKNKHSGKLILRIFVCSKEGLRTIDKRD-HLTKNPRAETRTSCDAEMIIKLDKsSGRYRVVQFEETHSHDLV 86 9**************************************999.99*********************99***************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MYGRRVEFSI RRHTHYKNKH SGKLILRIFV CSKEGLRTID KRDHLTKNPR AETRTSCDAE 60 MIIKLDKSSG RYRVVQFEET HSHDLVIQEC AHMLPSQRNV TSSQGAEMEL VQDSRIPLKL 120 SFELMGREVG GREALGFTKQ YQKNYLQSQR QKKLAYGEVG CLLKYFQNQA LENPSFFYAV 180 QLDSDEQITN ILWADVRMIL DYGLFGDVVS FDTTYRTNEA NRPFGVFVGF NHHRETVIFG 240 AALMYDETSD SFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-53 | FAR1 family protein |