PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001377.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 166aa MW: 17684.5 Da PI: 5.2498 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.2e-16 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + kGVr++k +g+Wv+eIr+p gk+ r +lg+f tae Aa a++ a +l++ Rmu_sc0001377.1_g000009.1 20 KLKGVRQRK-WGKWVSEIRVP---GKQDRLWLGSFSTAEAAAVARDVAYYCLRK 69 679*****9.**********8...556************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MSYSSEDSSS PTTAAGNGRK LKGVRQRKWG KWVSEIRVPG KQDRLWLGSF STAEAAAVAR 60 DVAYYCLRKP STLEGLNFPT VLPCSVNQAA DMSPRSIQKA ASDAGMAVDA QLINANSNSS 120 SQQNGRQANG SEPRVMQSDG CWEDTGESSS ANTGGEALSI SIEDYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 1e-36 | ERF family protein |