PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001232.1_g000014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 368aa    MW: 40382.1 Da    PI: 6.8591
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001232.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.22e-29150211159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp ++eitY+g+H+++
  Rmu_sc0001232.1_g000014.1 150 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPMILEITYRGRHTCT 211
                                59***************************98999**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MDMGVNWVQK SGIVNELTRG RELARQLQIH LNATSTLNPS TSSQTALTRE MLIQKIISSY  60
EKALSMLNSS SSAPMPVAVE QLHQQQPTFT VAASTGVVTI RMADSPPSLN GSPRSEDSDD  120
HKDPSRKRKG LARWTKQVRV TSGMGLEGPL DDGFSWRKYG QKDILGAKYP RGYYRCTHRN  180
VQGCLATKQV QRSDEDPMIL EITYRGRHTC TQAASTSVAS PPPKPMSPLP DQKPEPPQMN  240
QQPQHNMLLS LPEGLRVITE GLDTSHDHRG ELLFPSFNNN NYAGNFSPSL TMPTASTSGT  300
NYFSVLSQQD FGGNQNLQIS AAAESHDIIS AATSASNSPT VGLDFPFAEA DHQILYPNFT  360
FDDPGFFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-57WRKY family protein