PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001232.1_g000014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 368aa MW: 40382.1 Da PI: 6.8591 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.2 | 2e-29 | 150 | 211 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+rs+edp ++eitY+g+H+++ Rmu_sc0001232.1_g000014.1 150 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPMILEITYRGRHTCT 211 59***************************98999**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MDMGVNWVQK SGIVNELTRG RELARQLQIH LNATSTLNPS TSSQTALTRE MLIQKIISSY 60 EKALSMLNSS SSAPMPVAVE QLHQQQPTFT VAASTGVVTI RMADSPPSLN GSPRSEDSDD 120 HKDPSRKRKG LARWTKQVRV TSGMGLEGPL DDGFSWRKYG QKDILGAKYP RGYYRCTHRN 180 VQGCLATKQV QRSDEDPMIL EITYRGRHTC TQAASTSVAS PPPKPMSPLP DQKPEPPQMN 240 QQPQHNMLLS LPEGLRVITE GLDTSHDHRG ELLFPSFNNN NYAGNFSPSL TMPTASTSGT 300 NYFSVLSQQD FGGNQNLQIS AAAESHDIIS AATSASNSPT VGLDFPFAEA DHQILYPNFT 360 FDDPGFFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 1e-57 | WRKY family protein |