PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001208.1_g000032.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 313aa    MW: 36044.3 Da    PI: 4.6172
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001208.1_g000032.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM23.71.4e-07571411189
                        NAM  11 deelvveyLkkk.vegkkleleevikev.diykv.ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                                +eelv ++L+++ + g++++  + i+e  + y+  eP+    k   +   + + + fF+kr+k +++gkr  r++ sg+W+ + 
  Rmu_sc0001208.1_g000032.1  57 NEELVGYFLQHRdMMGHQFNS-NEISEYsEFYDQeEPRVVWdKnggSSVDDGEPLLFFTKRKKLNPNGKRFDRKVGSGMWSWQF 139
                                79*******988577777888.557777688876489888533343222245577************************98554 PP

                        NAM  88 kd 89 
                                + 
  Rmu_sc0001208.1_g000032.1 140 SR 141
                                43 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MNIYGQSSVD EGFQFTCEGN FDHATQDEDQ EVRTAGHGAE EKTRYGRRTR GATDDQNEEL  60
VGYFLQHRDM MGHQFNSNEI SEYSEFYDQE EPRVVWDKNG GSSVDDGEPL LFFTKRKKLN  120
PNGKRFDRKV GSGMWSWQFS REKNPRKARS STTTATTSSA QTNGKKRKRI VDNQLRKTKA  180
VRSEKAETCA EQQSTICVDL TDLEETNSES RDHQLLQVVD EDYHPELYPE LYPDNGPLFF  240
MEKLLAPSPL NVPDPLPHLE SNESQSRDHS YEDNSFISFL SAEFQQQLGE DNNFSIVSND  300
QYLGLQRLNM VDY