PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001184.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 343aa MW: 38157.5 Da PI: 8.4779

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001184.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	86.6	2.2e-27	134	194	1	59
---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k+++ pr+Y+rC++a +Cpvkkkv+r+ +d+++++ tYeg+Hnh+ Rmu_sc0001184.1_g000007.1 134 VKDGYQWRKYGQKVTKDNPsSPRAYFRCSMApTCPVKKKVQRCMQDKSILVATYEGHHNHD 194 58************997369****99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MEYPHTSSKE KQVDQQGDSL EADLQCVRKE NEALRFLLEA MSSKYTRLQA QLQLIRLDLQ 60 QNKSSTHDDH DHHEMTTTGS GCSSYDIFDP TTNKRVRTTA FAHCDHQQHH HFPVANKTSQ 120 FLVRTDSKDN TLIVKDGYQW RKYGQKVTKD NPSSPRAYFR CSMAPTCPVK KKVQRCMQDK 180 SILVATYEGH HNHDIINNSN SLLLGQIISS SSSSPPAPAL HNQIMSVDFP PAVVHGLLQS 240 SSTSTAADPI TMRSPPSRRE PITLDLTLSG SKSKSKSNQE ENRPGRGSPA GTTSTSTSTT 300 DQTCENEKIQ EYVTYLTKDP NFTVALAAAV ARSIKTDQPA RNP

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MEYPHTSSKE KQVDQQGDSL EADLQCVRKE NEALRFLLEA MSSKYTRLQA QLQLIRLDLQ  60
QNKSSTHDDH DHHEMTTTGS GCSSYDIFDP TTNKRVRTTA FAHCDHQQHH HFPVANKTSQ  120
FLVRTDSKDN TLIVKDGYQW RKYGQKVTKD NPSSPRAYFR CSMAPTCPVK KKVQRCMQDK  180
SILVATYEGH HNHDIINNSN SLLLGQIISS SSSSPPAPAL HNQIMSVDFP PAVVHGLLQS  240
SSTSTAADPI TMRSPPSRRE PITLDLTLSG SKSKSKSNQE ENRPGRGSPA GTTSTSTSTT  300
DQTCENEKIQ EYVTYLTKDP NFTVALAAAV ARSIKTDQPA RNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	7e-35	WRKY family protein