PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001137.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 215aa MW: 24039.4 Da PI: 8.6206 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 71.9 | 8.3e-23 | 44 | 101 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+W+KYGqK +k+ rsY++C ++C++kk+ e s+++p+ + ++Yeg Hnh+ Rmu_sc0001137.1_g000010.1 44 EDGYEWKKYGQKFIKNVGKFRSYFKCQNSNCRAKKRAEWSSSEPDELRVVYEGVHNHT 101 7********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MSDYRLILYR ETDHHDEDDQ IYGEGEEVQD NTSSGGSNKL VIPEDGYEWK KYGQKFIKNV 60 GKFRSYFKCQ NSNCRAKKRA EWSSSEPDEL RVVYEGVHNH TDNNASSAGS ASHSQQPDSS 120 SSLNPSTDAN RYDLYTQVFA MTSVGSLAAP SGRVGADKKF DTLSSRASIS SFSFSKRPNV 180 ALRRTRSPRV SAMAKELHFN KDGSAIKKLQ VSLFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 8e-16 | WRKY family protein |