PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001103.1_g000027.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 320aa MW: 37274.5 Da PI: 9.7203

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001103.1_g000027.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.4	9.7e-08	28	74	50	90
FAR1 50 kerr.....traetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 k+rr r tr++C a ++v k ++ ++vt+++ eHnH+la Rmu_sc0001103.1_g000027.1 28 KSRRnmipwGRRYTRVNCPAAFNVLYCKdSQLYKVTSFVREHNHDLA 74 2222244447899*********9999899***********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MSRIKPRKEN GVEKDRTPKK QNIGDAKKSR RNMIPWGRRY TRVNCPAAFN VLYCKDSQLY 60 KVTSFVREHN HDLAMDHELQ FLRANRKVEE RPVKQVENLR RAKIYTSAAY EHLVEQAGGY 120 EFVGFLTKDL YNILNRKRRK EQVDGDAQAA LTWMNIRGME SGQFWYKHIT NEEGRLANLF 180 WRDEQSLLDY NAYGDVLVMD STYKTNLYGK PLVVFVGCNN HRATVVFGFA LIRDEKEDTY 240 MWVFKNFLES MTYKQPVSVL TDGDESVRNV VVRLMPAAHH RLCAWHIGRN IGQNVKDDAA 300 QKLIGKMIYS SMSVGEWESA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	141	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-48	FAR1 family protein