PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001095.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 629aa MW: 72608.6 Da PI: 7.7149

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001095.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.8	1.6e-22	37	122	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Yn+YA e GFs+rk + ++ + ++ +r++ Cskeg++ +e+ e ++ +r trtgCka+++ + + +gkw++++++ H Rmu_sc0001095.1_g000002.1 37 LYNTYAFEKGFSIRKGTVRRD-AQSNVRQRDYFCSKEGFPLDEEMG-EVKKVRRLDTRTGCKAMIRFTVD-NGKWKIAQFNPVH 117 7**************9999.5555*************999.899999************9.********* PP FAR1 86 nHela 90 nHe+a Rmu_sc0001095.1_g000002.1 118 NHEFA 122 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MGSGWQRNVL ENGDKVGESD ELRVGMEVSN ETEAYELYNT YAFEKGFSIR KGTVRRDAQS 60 NVRQRDYFCS KEGFPLDEEM GEVKKVRRLD TRTGCKAMIR FTVDNGKWKI AQFNPVHNHE 120 FAKPEERQFL RSSRHIPTVR AAIIGSSKVD VSVRPTKSQS HLEKEMGSTD NAGHNCLHRM 180 KEEMIEGADG QSLLDYLKHQ QMEDSNFFYS VQVDQYNRVT NFFWRDSRSK LDYDCFGDVV 240 LFDTTFRTKK YNLICAPFVG VDHHWKNVLF GCAFLSDERT DSFTWLFETF LESMGNKRPK 300 TIFIDEDNAM EKAIEIILPG TRHRLCTWNI SKNASQYLAS HLANPEFKEC FNKCVHDCVT 360 EAEFEATWDD MVKKFNLENN LWLKKLYLLR EKWCPAFSSD TFTANIGCDQ RGENINTTFH 420 QISTKTMDLI GLAQHYEKKT KVLRSAEAEE DFRCKNGMPR LKVNTGIFKH AAAEYTIKMY 480 SFFENELLST FGVRMMEVGN DGNQYVYEAI EEGHQRVYII EYNSTTSRIC CSCKLFESMG 540 VLCRHALKVL GLKNFMSIPA QYIVKRWTRG AKKQNVMSGG LCELSCKREK SAQSLRLSEL 600 MHEGNNVFSI GSLCDSGTRI VKQKLVEII

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MGSGWQRNVL ENGDKVGESD ELRVGMEVSN ETEAYELYNT YAFEKGFSIR KGTVRRDAQS  60
NVRQRDYFCS KEGFPLDEEM GEVKKVRRLD TRTGCKAMIR FTVDNGKWKI AQFNPVHNHE  120
FAKPEERQFL RSSRHIPTVR AAIIGSSKVD VSVRPTKSQS HLEKEMGSTD NAGHNCLHRM  180
KEEMIEGADG QSLLDYLKHQ QMEDSNFFYS VQVDQYNRVT NFFWRDSRSK LDYDCFGDVV  240
LFDTTFRTKK YNLICAPFVG VDHHWKNVLF GCAFLSDERT DSFTWLFETF LESMGNKRPK  300
TIFIDEDNAM EKAIEIILPG TRHRLCTWNI SKNASQYLAS HLANPEFKEC FNKCVHDCVT  360
EAEFEATWDD MVKKFNLENN LWLKKLYLLR EKWCPAFSSD TFTANIGCDQ RGENINTTFH  420
QISTKTMDLI GLAQHYEKKT KVLRSAEAEE DFRCKNGMPR LKVNTGIFKH AAAEYTIKMY  480
SFFENELLST FGVRMMEVGN DGNQYVYEAI EEGHQRVYII EYNSTTSRIC CSCKLFESMG  540
VLCRHALKVL GLKNFMSIPA QYIVKRWTRG AKKQNVMSGG LCELSCKREK SAQSLRLSEL  600
MHEGNNVFSI GSLCDSGTRI VKQKLVEII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-112	FAR1 family protein