PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001047.1_g000050.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 116aa    MW: 13271 Da    PI: 6.5211
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001047.1_g000050.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.72.2e-1015109895
                        NAM   8 hPtdeelvveyLkkkvegkk.leleevikevdiykv...ePwdLpkkvka.....eekewyfFskrdkkyatgkrknr.atksg 81 
                                hPtd++l+  yL +++++ + +  +++++e++iy +    Pwd+ + +++     +++ +yfFs+ +k ++  +  +r   + g
  Rmu_sc0001047.1_g000050.1  15 HPTDSNLLGTYLYNRIKSPTpIGGKQTFPEIEIYGTtglPPWDIWR-IYEpskfpHQDYIYFFSRVKKLSS--RCFRRiGYDGG 95 
                                9****************99876666668888877654448****63.222222334456688888776554..4555545679* PP

                        NAM  82 yWkatgkdkevlsk 95 
                                +W++t   k+v+++
  Rmu_sc0001047.1_g000050.1  96 TWSETEAAKPVYVS 109
                                ***********984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MSLEDLDVGV VKTVHPTDSN LLGTYLYNRI KSPTPIGGKQ TFPEIEIYGT TGLPPWDIWR  60
IYEPSKFPHQ DYIYFFSRVK KLSSRCFRRI GYDGGTWSET EAAKPVYVSG IEEPYG