PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000931.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 539aa MW: 62566 Da PI: 8.7751

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000931.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.9	2.8e-17	51	161	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCka 64 kfY+ Y++++GFs+rk k+ +k+++++++r++vCs g++ + +k+ +++ r + +rt+C a Rmu_sc0000931.1_g000006.1 51 KFYKYYSHMAGFSTRKVKKDIHKTKKTVYRRQWVCSIAGRHVSVQKTkevggcgmkeapngdknkvsRKRLLRGTRISRTDCPA 134 6**************************************99999899********9876544444558899***** PP FAR1 65 klkvkkek.dgkwevtkleleHnHela 90 +++v ++ ++ ++v+k++++HnH+la Rmu_sc0000931.1_g000006.1 135 QFMVMWSNhQDLFYVSKFVTQHNHDLA 161 999988879*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MEMNGCNQFK EVVPDLGVEF GNVELNGRNF KDITYEDVKH LWFRTIDEAE KFYKYYSHMA 60 GFSTRKVKKD IHKTKKTVYR RQWVCSIAGR HVSVQKTKEV GGCGMKEAPN GDKNKVSRKR 120 LLRGTRISRT DCPAQFMVMW SNHQDLFYVS KFVTQHNHDL AIAPEVHFLR SHRNVKRHDI 180 AQVESLLQAQ VSISRAYEFL AQQSGGYHNM RFTEKDLYNK LHPKNMKYDA EGDAEMAVRR 240 MKAKGSTEKE FWFEYTIDKD RRLANIFWRD HQSLLDYIAY GDVLIVDSTY KTNKYSKPMV 300 LFVGCNNHRA TVVFGIALAC DEKEETYDWV FNQFIDSMQQ KRPLSVITDG DEAMKNALER 360 VMPQTRHRLC AWHIGRNIGQ NLNSEEVMEG IGQLMFASLT VPDWEFRWQS LILNNGLENN 420 AWVASLYNKR DRWAEAYFRD HFFGEACLNF SKSPESFNDA MIQLQTFKAK SMEYKEVVEV 480 ADTNLPPPTD SPTVVRDPLM SRTKGMSSNR QGHADSQAMD ILHYRNSIDG SSRMGTINS

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MEMNGCNQFK EVVPDLGVEF GNVELNGRNF KDITYEDVKH LWFRTIDEAE KFYKYYSHMA  60
GFSTRKVKKD IHKTKKTVYR RQWVCSIAGR HVSVQKTKEV GGCGMKEAPN GDKNKVSRKR  120
LLRGTRISRT DCPAQFMVMW SNHQDLFYVS KFVTQHNHDL AIAPEVHFLR SHRNVKRHDI  180
AQVESLLQAQ VSISRAYEFL AQQSGGYHNM RFTEKDLYNK LHPKNMKYDA EGDAEMAVRR  240
MKAKGSTEKE FWFEYTIDKD RRLANIFWRD HQSLLDYIAY GDVLIVDSTY KTNKYSKPMV  300
LFVGCNNHRA TVVFGIALAC DEKEETYDWV FNQFIDSMQQ KRPLSVITDG DEAMKNALER  360
VMPQTRHRLC AWHIGRNIGQ NLNSEEVMEG IGQLMFASLT VPDWEFRWQS LILNNGLENN  420
AWVASLYNKR DRWAEAYFRD HFFGEACLNF SKSPESFNDA MIQLQTFKAK SMEYKEVVEV  480
ADTNLPPPTD SPTVVRDPLM SRTKGMSSNR QGHADSQAMD ILHYRNSIDG SSRMGTINS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-58	FAR1 family protein