PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000903.1_g000030.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 286aa MW: 32191.8 Da PI: 8.7136

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000903.1_g000030.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.4	9.3e-20	17	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ll ++v+++G ++W++I++ ++ gR++k+c++rw + Rmu_sc0000903.1_g000030.1 17 KGPWSPEEDDLLRKLVQRHGARNWTLISKSIP-GRSGKSCRLRWCNQ 62 79****************************.*********985 PP
2	Myb_DNA-binding	54.4	2.9e-17	71	113	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd +++ a+ ++G++ W+tIar ++ gRt++ +k++w++ Rmu_sc0000903.1_g000030.1 71 AFTAEEDNIIAAAHSKFGNK-WATIARLLN-GRTDNAIKNHWNST 113 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MDSESVQRQQ RELDRVKGPW SPEEDDLLRK LVQRHGARNW TLISKSIPGR SGKSCRLRWC 60 NQLSPEVEHR AFTAEEDNII AAAHSKFGNK WATIARLLNG RTDNAIKNHW NSTLKRKYSS 120 MAEDGVFGGG GSIEEHHHHH HLRPEKKSAT VSVSGRGYSP TSPSGSDVSD SGVVPAVSSA 180 QVFRPVARAV LRTESPSSQN EMIHNEPEPS TLLTLSLPGG YSTELATRRE ERTTSLQQQQ 240 KEAENENRTM SFGPEFMSFM QEMIRREVRN YMDDMNGQHF GIPKLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-70	MYB family protein