PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000784.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 350aa    MW: 39211.8 Da    PI: 5.8722
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000784.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-20154203255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f taeeAa a+++a+ kl+g
  Rmu_sc0000784.1_g000017.1 154 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFETAEEAALAYDKAAYKLRG 203
                                59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MAAAIDIYSR SSSMSPDLSE ELMRALMPYM NSASSTSSIS PPTSPSTSYY SSSSYTPFYS  60
SSYPNLYPDF CSNTQMFPQV DFEQTGSLGL NQLTPSQIRQ IQTQMILQQQ QKQQIAALAP  120
LPNQYHHQHS HTLNFLGPKA IPMKQSGTPK PTKLYRGVRQ RHWGKWVAEI RLPKNRTRLW  180
LGTFETAEEA ALAYDKAAYK LRGDFARLNF PHLKHQGAHI TGDFGNYKPL PSAVDAKLQA  240
ICESLAVNSP KQGKTEELCS ETETKPMISA PKMVFDDSLS TDLKREWDSP KLEAISWSSS  300
PSRSCDESSA ESSSPESDIT FLDFSDSQWD ENDTFGLEKY PSVEIDWSAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.18e-60ERF family protein