PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000741.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 115aa MW: 13821.1 Da PI: 11.0233 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 54.4 | 5.1e-17 | 9 | 58 | 15 | 64 |
TCP 15 vggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64 +g+Rd v l a++a++++d+qd L +d++s +++WL+++ak+ i+el+ Rmu_sc0000741.1_g000001.1 9 QGPRDQHVQLAAHTAIQLYDVQDHLRYDRPSMAVDWLIKKAKATIDELPP 58 8**********************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
PPQQGLHRQG PRDQHVQLAA HTAIQLYDVQ DHLRYDRPSM AVDWLIKKAK ATIDELPPWN 60 PNLILFRQHL LRLCRYPLRR TRITRASISR WWRLRVLCLL IGEAQLWAAV EWWSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 3e-23 | TCP family protein |