PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000685.1_g000014.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 296aa    MW: 34624.8 Da    PI: 7.557
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000685.1_g000014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1385.4e-122345991
                       FAR1 59 rtgCkaklkvkkekdgkwevtkleleHnHelap 91
                               +++Cka+l+vk+++dgkw+v+++++eHnHel+p
  Rmu_sc0000685.1_g000014.1  2 KIDCKAMLHVKRRQDGKWVVQNFVKEHNHELSP 34
                               789****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MKIDCKAMLH VKRRQDGKWV VQNFVKEHNH ELSPADVHYF SCYRNIATGD LNNISTLHSV  60
GVKPSKIFAA LAKKCGGYQN IGFLQKDMRN FLDKKRRLEL ESGNAKAMLE HFTSMQEENP  120
NFFYAMDLDE EQRLRNVFWV DAKGREDYMI FGDVFSFDTT YINKYKMPFA PFIGVNNHFQ  180
STLLGCALLV DETTSTFVWL METWVRAMGG RALIAILTDQ YQAMKAAIAK VFPNARQRFC  240
LWHILKKLLE KLSSFLKENE NFMPVFNDCI YHSWTEEDFE NKWQSIIEIF NLGDDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-104FAR1 family protein