PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000631.1_g000026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 252aa MW: 27496.3 Da PI: 9.2143 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 94.4 | 2.3e-29 | 91 | 182 | 1 | 83 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec... 73 a+g+kdrhsk++T +g+Rd RvRl ++a++f+dLqd+L +d++s +++WL+++ak+ i+el++ ++ss+ + Rmu_sc0000631.1_g000026.1 91 ATGRKDRHSKVCTTKGPRDHRVRLATHTAIQFYDLQDRLRYDQPSMAVDWLIKKAKAVIDELPSWnpnsisvqTTSSP--Tili 172 589************************************************************996555544311111..1123 PP TCP 74 eaesssssas 83 +a++++++a+ Rmu_sc0000631.1_g000026.1 173 SAAQDKQNAN 182 2222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
LWINHHLPSL SLSDHSSTSR SASRSLPCST ATLSRYLPAE RLLSLNNSAA LIYADGSLII 60 STLAGSSTGI GTASSSTASE IVEARGHILK ATGRKDRHSK VCTTKGPRDH RVRLATHTAI 120 QFYDLQDRLR YDQPSMAVDW LIKKAKAVID ELPSWNPNSI SVQTTSSPTI LISAAQDKQN 180 ANLHFSMVEA SSSLFANRRG AMVGSSEVAE LVNQNSSNFL QVRMVWRPKL MLIFVCLQLP 240 LIEVGLEAEV VD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 5e-37 | TCP family protein |