PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000552.1_g000020.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GeBP
Protein Properties Length: 228aa    MW: 26933.4 Da    PI: 9.6421
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000552.1_g000020.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57351.72.4e-161612282495
                     DUF573  24 aktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                                +++g++p+ d++++++f+kks++++v+k+ql +Kir+++kKf+k+vkk    ++ +++k+h+  +fel kk+
  Rmu_sc0000552.1_g000020.1 161 KRKGVDPYVDMNGLHDFIKKSLNVNVTKKQLQDKIRKMRKKFEKNVKK----EKYNLTKAHNLTAFELLKKV 228
                                5799********************************************....8899************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEVPGDEEEI DQLICVTGRL IQLYHEKYIQ KTPCMTSSQT GYIWLMEVLE GNESRCYNQF  60
RMDKNCFLML LNDVEKMLKG SKNISTVEML AMSLYILGQG QTNRNTQERF QRSGETVSRY  120
FDKMLKIFYN MAKVLIKPED PEFTSIPNEI LNDSRYMPHF KRKGVDPYVD MNGLHDFIKK  180
SLNVNVTKKQ LQDKIRKMRK KFEKNVKKEK YNLTKAHNLT AFELLKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-08GeBP family protein