PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000551.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

ERF

Protein Properties

Length: 240aa MW: 26132.3 Da PI: 8.2196

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000551.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22	4.2e-07	2	24	32	54
AP2 32 slgkfgtaeeAakaaiaarkkle 54 +lg+f +aeeAa+a+++a+ + Rmu_sc0000551.1_g000005.1 2 WLGTFESAEEAARAYDEAAILMS 24 9*****************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MWLGTFESAE EAARAYDEAA ILMSGRNAKT NFPVTTNEIA AANNKNSINN KSNSSSTTTT 60 SPSATLSAKL RKCCSASLTC LRLDTENSHI GVWQKRAGPR SDSNWLMMVE LGRKSGLEAE 120 KVESTIVPQV SDGHETQGLN EEKRIALQMI EELLRRYPCF AGSNSGGCAR SRLLGRLGLE 180 VRSPGIEEAM AEPEEIPGAT LMEKIYSHRR SSSSSSNNHK LSKNADAVKK ADDVKHKADM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15360.1	4e-32	ERF family protein