PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000538.1_g000060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 226aa MW: 25721.2 Da PI: 8.2174 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.9 | 4.6e-20 | 44 | 129 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YA e+ Fsv++s++ ksk+ ei++++++C keg++++++ ++++ rtgC ak+ k+ g ++vt++ + Rmu_sc0000538.1_g000060.1 44 EFYNKYAFEARFSVQRSSTAKSKDGSEIIRQELCCRKEGHSQKHTAL---PKKRKGIIRTGCLAKIAAVKR-CGIYVVTQFTEA 123 6***************************************9998777...7888999*********98888.8*********** PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0000538.1_g000060.1 124 HNHPLT 129 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MFQAMNLGSV SCSTETTKVY TPQVTDELKP TKNREFRTLD ELFEFYNKYA FEARFSVQRS 60 STAKSKDGSE IIRQELCCRK EGHSQKHTAL PKKRKGIIRT GCLAKIAAVK RCGIYVVTQF 120 TEAHNHPLTT PEKVHLLPSH CQVSNATNCL TMELGLVNIL THQQISLLEV QSGGIENMGC 180 TGKDIYNYER DKREELKGHD GDMLYAHFFS TAGEEFIFQF QDRGRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-18 | FAR1 family protein |