PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000528.1_g000025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 647aa MW: 74575.8 Da PI: 7.4608 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 71.7 | 1.7e-22 | 37 | 122 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Yn+YA e GFs+rk + ++ + ++ +r++ Cskeg++ +e+ e ++ +r trtgCka+++ + + +gkw++++++ H Rmu_sc0000528.1_g000025.1 37 LYNTYAFEKGFSIRKGTVRRD-AQSNVRQRDYFCSKEGFPLDEEMG-EVKKVRRLDTRTGCKAMIRFTVD-NGKWKIAQFNPVH 117 7****************9999.5555*****************999.899999****************9.************* PP FAR1 86 nHela 90 nHe+a Rmu_sc0000528.1_g000025.1 118 NHEFA 122 **986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 647 aa Download sequence |
MGSGWQRNVL ENGDKVGESD ELRVGMEVSN ETEAYELYNT YAFEKGFSIR KGTVRRDAQS 60 NVRQRDYFCS KEGFPLDEEM GEVKKVRRLD TRTGCKAMIR FTVDNGKWKI AQFNPVHNHE 120 FAKPEERQFL RSSRHIPTVR AAIIGSSKVD VSVRPTKSQS HLEKEMGSTD NAGHNCLHRM 180 KEEMIEGADG QSLLDYLKHQ QMEDSNFFYS VQVDQYNRVT NFFWRDSRSK LDYDCFGDVV 240 LFDTTFRTKK YNLICAPFVG VDHHWKNVLF GCAFLSDERT DSFTWLFETF LESMGNKRPK 300 TIFIDEDNAM EKAIEIILPG TRHRLCTWNI SKNASQYLAS HLANPEFKEC FNKCVHDCVT 360 EAEFEATWDD MVKKFNLENN LWLKKLYLLR EKWCPAFSSD TFTANIGCDQ RGENINTTFH 420 QISTKTMDLI GLAQHYEKKT KVLRSAEAEE DFRCKNGMPR LKVNTGIFKH AAAEYTIKMY 480 SFFENELLST FGVRMMEVGN DGNQYVYEAI EEGHQRVYII EYNSTTSRIC CSCKLFESMG 540 VLCRHALKVL GLKNFMSIPA QYIVKRWTRG AKKQNVMSGG LCELSCKREK SAQSLRLSEL 600 MHEGNNVFSI GSLCDSGTRI VKQKLVEAMK LLESDEETTS MLGTLNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-112 | FAR1 family protein |