PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000524.1_g000034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 156aa MW: 17364.6 Da PI: 9.1488 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 76.5 | 7.8e-24 | 55 | 113 | 2 | 60 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaik 60 + +kdrhsk++T++g+Rd v + a++a++f+d+qd+ G+d++sk+++W +++ak+ai Rmu_sc0000524.1_g000034.1 55 TDRKDRHSKVYTAKGPRDHLVQITAHTAIQFYDVQDRVGYDRPSKAVDWIIKKAKAAIN 113 679******************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MEYAGRKIGE SHNNLHHRAM TSSSAASRLG LGIRTASSSI ASEIVEARGH ILRATDRKDR 60 HSKVYTAKGP RDHLVQITAH TAIQFYDVQD RVGYDRPSKA VDWIIKKAKA AINFMELELN 120 FCSDNFFFDG ADIRLAGHAE REPPFLDGGG SKFFVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 1e-34 | TCP family protein |