PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000507.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 224aa MW: 24511.8 Da PI: 7.8726 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 66.9 | 7.1e-21 | 16 | 61 | 2 | 47 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdskt 47 +g kd+hsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk Rmu_sc0000507.1_g000009.1 16 TGPKDSHSKVCTTKGPRDRSIRLVAHTAIQFYDMQDRLGYDQPSKG 61 788*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
LLLPPPLEKS WRLKATGPKD SHSKVCTTKG PRDRSIRLVA HTAIQFYDMQ DRLGYDQPSK 60 GVGGENESGG GQAIGGGGRD ELGVNGSTTR ERSFITCSGA LATLSGAKIG QCPRDKRVVK 120 DESTEQKLWC IRLTPEELEN FGTPDFTIYN AVVENVTFDE HTREVDYSDK SITENSRAAY 180 PIEYIPNAKI PFVGPHPKNV ILLACDAFVV LPPVSKLNLA LKKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 3e-20 | TCP family protein |