PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000449.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 373aa MW: 42284.1 Da PI: 6.4052

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000449.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	79.4	4e-25	130	190	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg+ WrKYGqK++ ++ +prsY+rC+++ gC+++k+v++ ++dp+++ +tY g+H+++ Rmu_sc0000449.1_g000005.1 130 DDGHPWRKYGQKQILNASHPRSYFRCSHKydqGCKATKQVQKVENDPSLFRTTYFGNHTCK 190 8*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MESLECTWPA SWNLQEKMKE ELVRGHELAN QLHLVVRNGD GESAKGLVAK IVCSFTNSLS 60 LLGGNHDSKG KHIQANTSSN TVALPTPVDS SSWVALEAIK RTEMLINSRS SSKKRKTSHS 120 WSRDAPDFID DGHPWRKYGQ KQILNASHPR SYFRCSHKYD QGCKATKQVQ KVENDPSLFR 180 TTYFGNHTCK HSILKAPESI LDNVSGGSPR EESNSKFMIT FENNNNFPYE QEHPFFSSYS 240 STEREIIKSN HVASSRSSSL SCDYLVPPDQ VMVFESSEPI SRLPTMMELH SEDMITFENN 300 NNFPYEQEHA FLSSYSSTER EIIKSNHVAS RQSSSLSCDY LVPPDPVMVC ESSETISRLP 360 TMMELHSEDM IYY

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MESLECTWPA SWNLQEKMKE ELVRGHELAN QLHLVVRNGD GESAKGLVAK IVCSFTNSLS  60
LLGGNHDSKG KHIQANTSSN TVALPTPVDS SSWVALEAIK RTEMLINSRS SSKKRKTSHS  120
WSRDAPDFID DGHPWRKYGQ KQILNASHPR SYFRCSHKYD QGCKATKQVQ KVENDPSLFR  180
TTYFGNHTCK HSILKAPESI LDNVSGGSPR EESNSKFMIT FENNNNFPYE QEHPFFSSYS  240
STEREIIKSN HVASSRSSSL SCDYLVPPDQ VMVFESSEPI SRLPTMMELH SEDMITFENN  300
NNFPYEQEHA FLSSYSSTER EIIKSNHVAS RQSSSLSCDY LVPPDPVMVC ESSETISRLP  360
TMMELHSEDM IYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-30	WRKY family protein