PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000429.1_g000061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 200aa MW: 22916.8 Da PI: 9.6553 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 83 | 4.9e-26 | 37 | 126 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn+Y+ + GFs+r++++ k+kr++e t+r fvC keg r+++k++ r++raetrtgC akl +k+++ ++k+ vt++++ Rmu_sc0000429.1_g000061.1 37 DFYNRYGGKKGFSIRRETHGKNKRTKELTSRLFVCCKEGIRSKDKRD-YMIRKPRAETRTGCGAKLCIKLNRrNNKFFVTHFVE 119 6*******************************************999.99*********************99*********** PP FAR1 84 eHnHela 90 HnH+l+ Rmu_sc0000429.1_g000061.1 120 GHNHPLV 126 *****96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MDNSLGATDI DIENSDLELD WKPRKGMEFD SEQAAYDFYN RYGGKKGFSI RRETHGKNKR 60 TKELTSRLFV CCKEGIRSKD KRDYMIRKPR AETRTGCGAK LCIKLNRRNN KFFVTHFVEG 120 HNHPLVGKEC SHMLPSQRKV QDSQGIDIDL AHDSGIGVTS LYELMGKQAG GRDDVGYTKQ 180 DVKNYLRSRR QRSLEYGEAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-33 | FAR1 family protein |