PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000429.1_g000038.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 335aa    MW: 39010.1 Da    PI: 10.3467
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000429.1_g000038.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.83e-07171061488
                       FAR1  14 vrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklk.vkkekdgkwevtkle 82 
                                +r+s s k  ++++i k +f+C ++g+ +  k+               +ek+ r + ++++gC  +l+ ++ e+ ++w+++ + 
  Rmu_sc0000429.1_g000038.1  17 IRRSDSGKIGNKKKIPKIRFCCERNGQYKAYKSLksdintqesdedsrKEKRPRLTGTKKCGCPFSLRgINIENGDEWKLEVVC 100
                                45555566688999************99887766799******99865555555667788888888875677779********* PP

                       FAR1  83 leHnHe 88 
                                  HnH+
  Rmu_sc0000429.1_g000038.1 101 GVHNHA 106
                                *****7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MVSINHINLR NNFVIVIRRS DSGKIGNKKK IPKIRFCCER NGQYKAYKSL KSDINTQESD  60
EDSRKEKRPR LTGTKKCGCP FSLRGINIEN GDEWKLEVVC GVHNHAASKY LHGHSFAGRL  120
SEKENSLLMD MSTSLMRPKE ILTAIKRRNP KNVTAMKTIY NARQRHRTKI RAGRTQMQQL  180
LSNLFEHKYI EHHRSDGDKV TDLFWCHPYS IEILRTFPHV LIMDCTYKTN RYRFPLLEIV  240
GITSTNKTFN VAFAYISKEK EDNYTWALTR LKTLLDDKCA PSVMVTDREL ALMNSISNVF  300
PNTRHVLCRW HINKQVLTHC KKLFATKEGW DTFKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1 family protein