PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000410.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 268aa    MW: 30018.5 Da    PI: 4.6194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000410.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-19124174255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  Rmu_sc0000410.1_g000002.1 124 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFETAEEAALAYDKAALRIRG 174
                                8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAVHSVNHDS AAAPEAILEN VWASFIGVDG GNQETSNTPE MSKSWEELPS LDGREGSMEI  60
LQRLPSLGRW MSMGAEAWEE LLDTHIIPSC DIEKSCNEKL EGNEDAKPEA EEKVERLEKV  120
ATKHYRGVRR RPWGKYAAEI RDSSRKGARV WLGTFETAEE AALAYDKAAL RIRGTKAHLN  180
FPFETVAKAM GLENCSFNNS CSTTTSSQNG LNPRKRGVRE WEENVEVMTG EPALKRNASM  240
EKMFGDEFDV FEFQDLGTDY LDSLLSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.19e-44ERF family protein