PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000389.1_g000038.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 357aa    MW: 38011.8 Da    PI: 8.6499
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000389.1_g000038.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.67.6e-403595262
                     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                               +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+++
  Rmu_sc0000389.1_g000038.1 35 PEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKRVR 95
                               6899******************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MSSDNTPAKK PADDTQQGGG GSGNSRKTTS SKVPPEQALK CPRCDSPNTK FCYYNNYSLT  60
QPRHFCKTCR RYWTKGGALR NVPIGGGCRK NKRVRSSSSR LSCSLDSKDS GDSASDHMGL  120
KFFHGISPAM DFQLGGLSLP RLNHHPSSSS AVVTALYNNN NSQFSPYGDV SVTSGLTLDP  180
SGGASGNSSF MGFNYPLTLG SGSGGGVGFQ QNNMNSSMSV HSSLASSIES LSSINQDLHW  240
KLQQQRLSML FGTTIAGDNQ TQPSQKDMQM NDLEKTQTAP ILFQNLEISK PKESTGGGDT  300
AATEWFFGNS YAPPPPVTPT PTNSGGNGGG NENNAGNWNT HGVVQAWGDL QQYNALP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.14e-54Dof family protein